PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43986.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 146aa    MW: 16861.2 Da    PI: 6.6796
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB68.31.4e-211771793
       NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93
                m+k+lP +a i +da e +q+ +s fi  +t +a++  + +krk ++++d++wa+ ++G+++y e l+ yl+kyr+ 
  PHT43986.1  1 MHKTLPMHATINDDAVEAIQKIMSYFIHRITIKANEYYHLDKRKIVTAEDIIWAMNNVGLHNYGELLTHYLHKYRQE 77
                89*************************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MHKTLPMHAT INDDAVEAIQ KIMSYFIHRI TIKANEYYHL DKRKIVTAED IIWAMNNVGL  60
HNYGELLTHY LHKYRQENSV HYLRHNLMQP NAPSSLILSI NSVPMMSYGY PHFSPNVLLN  120
DLVAAVMTNV RKENIVAEND EDPDSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.23e-22NF-YB family protein