PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44052.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 742aa MW: 80641.6 Da PI: 6.3995

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	7e-33	318	375	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k PHT44052.1 318 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSQ-EGHITEIIYKGAHNHPK 375 8**************************************.*************85 PP
2	WRKY	104.1	7.5e-33	533	591	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ PHT44052.1 533 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERASHDLKSVITTYEGKHNHD 591 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MGGFDDHVAI MGDWMPPSPS PRTFFSSLLG DDVGSRSTFQ GTNETKSGNL ASGPQENVGT 60 SDGNDEAQAA VSEQQPVSDQ KMNSRGGLLE RMAARAGFNA PKLNTESLRP ADMRQNQGVR 120 SPYLTIPPGL SPTTLLESPV FLSNSLVQPS PTTGKFPFSS GIESRNSTLM MEDPDNRKEN 180 AFESINSSSF SFKPVPETAP SLFPGTNSRS WLQVNPPNFS QQGFPNIEVS VHSQNSLQSH 240 RMEATQNLVQ NGTLNQASDF PRFSAEMDVK GSNVTPESRT FQTVGSTVEH SPPLDEPQDE 300 DIDQRGGGDP NVVGAPAEDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCPV KKKVERSQEG 360 HITEIIYKGA HNHPKPPPNR RSALGSTNSL GDLRLDGVEQ GASGVNGDLG RANIQKAPGS 420 GGGFDWRSNN LDATSSVNLG SEYCNRSAPF PAQNNSQLES GDAVDASSTF SNDEDEDDRG 480 THGSISQGYD GEGDESESKR RKLETYSADM TGATRAIREP RVVVQTTSEV DILDDGYRWR 540 KYGQKVVKGN PNPRSYYKCT SAGCNVRKHV ERASHDLKSV ITTYEGKHNH DVPAARNSSH 600 VNSGASNTHP TAVTAPAQNH LHRPEPAQLQ NAMARFDRQP SLGSFGLAGR PQLGPTPGFS 660 YGMNPQGLSS LSMAGFHPNQ NKPGEVPIHP YLGQPRPMHD MGFMFPKEEP KLEPMSDPGL 720 NLSNGSNVYQ QFMNRLPLGP HM

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MGGFDDHVAI MGDWMPPSPS PRTFFSSLLG DDVGSRSTFQ GTNETKSGNL ASGPQENVGT  60
SDGNDEAQAA VSEQQPVSDQ KMNSRGGLLE RMAARAGFNA PKLNTESLRP ADMRQNQGVR  120
SPYLTIPPGL SPTTLLESPV FLSNSLVQPS PTTGKFPFSS GIESRNSTLM MEDPDNRKEN  180
AFESINSSSF SFKPVPETAP SLFPGTNSRS WLQVNPPNFS QQGFPNIEVS VHSQNSLQSH  240
RMEATQNLVQ NGTLNQASDF PRFSAEMDVK GSNVTPESRT FQTVGSTVEH SPPLDEPQDE  300
DIDQRGGGDP NVVGAPAEDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCPV KKKVERSQEG  360
HITEIIYKGA HNHPKPPPNR RSALGSTNSL GDLRLDGVEQ GASGVNGDLG RANIQKAPGS  420
GGGFDWRSNN LDATSSVNLG SEYCNRSAPF PAQNNSQLES GDAVDASSTF SNDEDEDDRG  480
THGSISQGYD GEGDESESKR RKLETYSADM TGATRAIREP RVVVQTTSEV DILDDGYRWR  540
KYGQKVVKGN PNPRSYYKCT SAGCNVRKHV ERASHDLKSV ITTYEGKHNH DVPAARNSSH  600
VNSGASNTHP TAVTAPAQNH LHRPEPAQLQ NAMARFDRQP SLGSFGLAGR PQLGPTPGFS  660
YGMNPQGLSS LSMAGFHPNQ NKPGEVPIHP YLGQPRPMHD MGFMFPKEEP KLEPMSDPGL  720
NLSNGSNVYQ QFMNRLPLGP HM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein