PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44057.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 315aa MW: 34940.9 Da PI: 7.4436

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0015	38	58	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C+k F + L H+r H PHT44057.1 38 CHVCSKGFGSGKALGGHMRIH 58 *******************99 PP
2	zf-C2H2	14.7	8.8e-05	92	111	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C++Cgk F++ +L H+r PHT44057.1 92 TCSICGKNFPSMKSLFGHMR 111 6******************8 PP
3	zf-C2H2	16	3.4e-05	223	245	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ Cgk+F ++ L H ++H PHT44057.1 223 YKCNTCGKTFATHQALGGHKSSH 245 9***************9999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MEIGTGSLWI SEDDKFEDHE YDDVMKHGVK EDNKRRICHV CSKGFGSGKA LGGHMRIHVQ 60 ASKKLLLSGR KGNKSKPVLQ TDEQVDDQLL PTCSICGKNF PSMKSLFGHM RCHPERAWRG 120 IQPPEDIDRK GTGTVPVWSV TAKRGRKANA EDATYSGSKD EEQLHDAVHH LMLLANGDSI 180 ESGLIPEEFE KTNSNSLTSK AENENEASNK KKTKWRHLDS EKYKCNTCGK TFATHQALGG 240 HKSSHNKFRI VIQNSHGTSI GANSEDAPAS SSKISQRILD FDLNELPPDH EDEQLSGAWT 300 LQKYGRTSVG SFEGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	1e-22	C2H2 family protein