PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44259.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 486aa MW: 53199.3 Da PI: 6.1372

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.6	7.1e-06	376	414	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PHT44259.1 376 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 414 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MAEEFQLGRG NWWESTSTST ISSSSRNNKV IDSGNSSCTT PSASSTTVLS SMGSNFVNWP 60 SEIHEDIKVR SDNSSMVFLG TDSQKRYASE SSVAGGGGGG GVGQGVLSVD DPNLQMMGLG 120 LSSQGLDWNQ PFLSEKSGSD FRSMLQEGLS SNVNYQQEGS CHEQDQNNWS TQKLYHGNSD 180 DSSINDYNKQ ILNRGISLDH QSSTVFSRQN NLENSVPYGS PSNIQQQEAN NFTSVSRSLY 240 YNPSYNNPSN CDMNIPPTSI DVMSTSSSSS SWSKFPQFLR TSDPPKIQQW PLQPPLLPHG 300 GTPFWSATSA AAADDVHSGF VPSLHPQLPT NPTVDEKPKH TGEVRNTSII TKKNSSETSN 360 KRPRNEASSP SPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVNV 420 LSTPYMKSGA SMQHQQSGDK SNVNQEERKQ DLRSRGLCLV PVSSTFPVTH ETTVDFWTPT 480 FGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MAEEFQLGRG NWWESTSTST ISSSSRNNKV IDSGNSSCTT PSASSTTVLS SMGSNFVNWP  60
SEIHEDIKVR SDNSSMVFLG TDSQKRYASE SSVAGGGGGG GVGQGVLSVD DPNLQMMGLG  120
LSSQGLDWNQ PFLSEKSGSD FRSMLQEGLS SNVNYQQEGS CHEQDQNNWS TQKLYHGNSD  180
DSSINDYNKQ ILNRGISLDH QSSTVFSRQN NLENSVPYGS PSNIQQQEAN NFTSVSRSLY  240
YNPSYNNPSN CDMNIPPTSI DVMSTSSSSS SWSKFPQFLR TSDPPKIQQW PLQPPLLPHG  300
GTPFWSATSA AAADDVHSGF VPSLHPQLPT NPTVDEKPKH TGEVRNTSII TKKNSSETSN  360
KRPRNEASSP SPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVNV  420
LSTPYMKSGA SMQHQQSGDK SNVNQEERKQ DLRSRGLCLV PVSSTFPVTH ETTVDFWTPT  480
FGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	7e-70	bHLH family protein