PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44350.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 308aa    MW: 35751.8 Da    PI: 4.3301
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.42.1e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEde+l +++   G g+W++ ++  g+ R++k+c++rw +yl
       PHT44350.1 14 KGRWTKEEDEILTNYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding44.53.4e-1467110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E+ +++++ + lG++ W+ Ia++++ gRt++++k++w++
       PHT44350.1  67 RGNITSDEEAIIIKLRATLGNR-WSVIAEYLP-GRTDNEIKNYWNS 110
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRTPCCEKE GLKKGRWTKE EDEILTNYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LKTDLKRGNI TSDEEAIIIK LRATLGNRWS VIAEYLPGRT DNEIKNYWNS RLSRKVESLR  120
IPSDEKLPLA VVEMAKNKEI QEQIVKRQRR KRKADVPDSN FMTETSVSTS SCCNNNNNVM  180
DCNDDQMSWH DDVVLMDDKD AELDQDFIFN CLWDCQGEDL EIVENNSNNN NEVLSNDNYD  240
QLDCWNWDEI LNNEIWANEE ATRQENDNNM SHISLFDIND DVQNCMNQQV PIENVDPMQS  300
DLVAWLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.18e-67MYB family protein