PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44404.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 178aa MW: 20596.2 Da PI: 5.6536

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.1	1.6e-14	8	134	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 GfrFhPtd e + +L+k +++++++ + + +++d+y++ +Pw++ + + a ++++y ++ ++k + + g Wk + + k+v++ PHT44404.1 8 SGFRFHPTDTEGL-TFLQKFMAKQEMNDSGFiTTNIDVYDSeeDPWKIYSrgvpC-GAADDSLYRYFITKK----------SSNLGNWKLQSEGKPVHR 94 7********99.99*****9998883455688558*7334432.334444543333222..........234699******99 PP NAM 95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ ++g+kk + + ++++++ W+m+ey+l PHT44404.1 95 DsssSTVVIGCKKKMCYMinnNEEHREDDGHYWLMKEYEL 134 86555566******55433444445678****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MGQRGVRSGF RFHPTDTEGL TFLQKFMAKQ EMNDSGFITT NIDVYDSEED PWKIYSRGVP 60 CGAADDSLYR YFITKKSSNL GNWKLQSEGK PVHRDSSSST VVIGCKKKMC YMINNNEEHR 120 EDDGHYWLMK EYELSNVILH QFDDDRRDYV LCAIKKKFIE TCLSEMGNVS EEFGAIQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-09	NAC family protein