PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44407.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 686aa MW: 74182.5 Da PI: 4.5372

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.2	1.9e-15	442	488	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn Er+RRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq PHT44407.1 442 VHNLSERKRRDRINEKMRVLQELIPRC-----NKADKASMLDEAIEYLKSLQ 488 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MMKKSHLLEA TVASSVPVYI QEDDEVNCWL QSPFDDDDDD DSSFAADFLC TPPCSAAEET 60 LEEIDATMSC AAVSSAAELP GEIDKISSAA MISAALPGEI DTTTSCAAVI SAAELPVEID 120 KISSAVKISA ALPGEIDTTT SCAAVISAAE LPVEIDKIDD MQSCAAMISA AMPGDIDTTP 180 SYAAVISTAA LPGETHKIDN MQSCAAVISA AALPGETIAS SSPPRPIIPQ LRCTEGEVTH 240 RLQDVQYAKP NCAVVTSAAT PEEEIDKIDA LTVEIRPAET IASSSARPIL PQLRCTEGEL 300 LQNFKHFSRN CTSNSGHSVK ASTVVESNET PIASVPEHIH SRVLDNATSV SAAAATVAVS 360 GGKEVMTSTF XXXXXXXXXX XXXXXXXXPP HAAEMAVDDR KRRISEFVDD EGQNEDVEFE 420 SADAKKQVKS STSAKRSRAA EVHNLSERKR RDRINEKMRV LQELIPRCNK ADKASMLDEA 480 IEYLKSLQLQ LQMMSTGCSM VPMMYPGFPQ YMPTVGMNMG MGMSMEMGMN RPIVPYQPLM 540 PSPAMQNAAA VAQMAPRYPL PAYHLPPFLA PDSSRIPVAN QPDPPRLNSL VGHNTNQPKL 600 PHFADSNDQY FGLQQARLMI RGVEQLNCSK PNSCREGRAG NHRTGKHPIQ MTMFYILHYC 660 GSCIDAEEEG KDFSILLEAK SDLEFL

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MMKKSHLLEA TVASSVPVYI QEDDEVNCWL QSPFDDDDDD DSSFAADFLC TPPCSAAEET  60
LEEIDATMSC AAVSSAAELP GEIDKISSAA MISAALPGEI DTTTSCAAVI SAAELPVEID  120
KISSAVKISA ALPGEIDTTT SCAAVISAAE LPVEIDKIDD MQSCAAMISA AMPGDIDTTP  180
SYAAVISTAA LPGETHKIDN MQSCAAVISA AALPGETIAS SSPPRPIIPQ LRCTEGEVTH  240
RLQDVQYAKP NCAVVTSAAT PEEEIDKIDA LTVEIRPAET IASSSARPIL PQLRCTEGEL  300
LQNFKHFSRN CTSNSGHSVK ASTVVESNET PIASVPEHIH SRVLDNATSV SAAAATVAVS  360
GGKEVMTSTF XXXXXXXXXX XXXXXXXXPP HAAEMAVDDR KRRISEFVDD EGQNEDVEFE  420
SADAKKQVKS STSAKRSRAA EVHNLSERKR RDRINEKMRV LQELIPRCNK ADKASMLDEA  480
IEYLKSLQLQ LQMMSTGCSM VPMMYPGFPQ YMPTVGMNMG MGMSMEMGMN RPIVPYQPLM  540
PSPAMQNAAA VAQMAPRYPL PAYHLPPFLA PDSSRIPVAN QPDPPRLNSL VGHNTNQPKL  600
PHFADSNDQY FGLQQARLMI RGVEQLNCSK PNSCREGRAG NHRTGKHPIQ MTMFYILHYC  660
GSCIDAEEEG KDFSILLEAK SDLEFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	447	452	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	3e-30	bHLH family protein