PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44443.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 215aa    MW: 24415.6 Da    PI: 6.3959
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.91.4e-2146271128
         NAM  71 gkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +k  +rat sgyWkatgkd++v++  +gel+g++ktLvfyk+rap+g kt W+mhe+r+
  PHT44443.1   4 KKADKRATISGYWKATGKDRTVFDPqTGELIGMRKTLVFYKNRAPHGIKTGWIMHEFRI 62 
                 567899*****************9878899***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MSAKKADKRA TISGYWKATG KDRTVFDPQT GELIGMRKTL VFYKNRAPHG IKTGWIMHEF  60
RIENPHIPPK EDWVLCRVFH KGTKDENINS TNKLSPKNMY EACVTSINIM DNHEATMPKL  120
LPYGEAGYSP STALSFSNNS IHQSQNSSNL QLSQEINYKA LANEMIHSKC GKEDEFGFLF  180
DMNYFEESNL QDGGVINSCL EGDMKFEDEN SLVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.15e-42NAC family protein