PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44534.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 186aa    MW: 21614.9 Da    PI: 4.3615
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.99.9e-13952146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W+ +Ed +l++ + +lG g+W++ ar  g  R+++++k++w++
       PHT44534.1  9 KGPWSSDEDSKLIHSISLLGQGRWDSLARFAG--RSDNDVKNYWRT 52
                     79*****************************8..**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEASMEMKKG PWSSDEDSKL IHSISLLGQG RWDSLARFAG RSDNDVKNYW RTKVQKHAKE  60
LHCDVNNSHQ FRHFLLYQWL PSLLAQQISL TTPPSSEIMT ENNSPNNTMT CPNADFISSP  120
QDDNTCYNIW NNLSSFEDEI NISHDYSVPT NDEYYCHNYW PTTPSQVLLP DEMLCLDDDM  180
DLWLFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.12e-22MYB family protein