PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44672.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 376aa MW: 42575.8 Da PI: 10.0851

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.2	5.4e-17	143	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f+k +++s+v + +l lp +f+e+h +++++++l +e+g ++e + +k+ + l++GW+ F+ +++L++gD ++F+l++ ++f +v ++r+ PHT44672.1 143 FIKSMVRSHVYSCFWLGLPTRFCEDHLP--KSTVDVVLVNEEGLEYEALF--IGKRTG--LSGGWRAFALDHKLDDGDALIFELIEPTKF--KVYIIRA 233 89**********************53..3789************..555544..**********************987777..9999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MANHSNTNSY EEERRQRVLD NKKRFEDLGI LNISKNLSNL TKSEKKSDYK TELRRGRQKT 60 YDVYMSEPRR SSRARNPVSS YRDEIDDIEL PSLRKRSKFG SSWASYLARP LEEVKVASFE 120 ERAQALKSAE KLHSNLQSGN PYFIKSMVRS HVYSCFWLGL PTRFCEDHLP KSTVDVVLVN 180 EEGLEYEALF IGKRTGLSGG WRAFALDHKL DDGDALIFEL IEPTKFKVYI IRASHCSNEV 240 DKSAAEKEES EAEKASTNVT KKTKKTSNKS KVSTVAKEEV YIVRASHRSS GVDKSGAEKE 300 ESEAEEASTN ATKKRKKTSN KSKIPTVAEE ESEAEEASTN ATKKRKKTSN KSKVPTVAKE 360 KEPVKASATR RSTRIK

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MANHSNTNSY EEERRQRVLD NKKRFEDLGI LNISKNLSNL TKSEKKSDYK TELRRGRQKT  60
YDVYMSEPRR SSRARNPVSS YRDEIDDIEL PSLRKRSKFG SSWASYLARP LEEVKVASFE  120
ERAQALKSAE KLHSNLQSGN PYFIKSMVRS HVYSCFWLGL PTRFCEDHLP KSTVDVVLVN  180
EEGLEYEALF IGKRTGLSGG WRAFALDHKL DDGDALIFEL IEPTKFKVYI IRASHCSNEV  240
DKSAAEKEES EAEKASTNVT KKTKKTSNKS KVSTVAKEEV YIVRASHRSS GVDKSGAEKE  300
ESEAEEASTN ATKKRKKTSN KSKIPTVAEE ESEAEEASTN ATKKRKKTSN KSKVPTVAKE  360
KEPVKASATR RSTRIK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	313	317	KKRKK
2	313	347	KKRKKTSNKSKIPTVAEEESEAEEASTNATKKRKK
3	314	348	KKRKKTSNKSKIPTVAEEESEAEEASTNATKKRKK
4	343	347	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	5e-72	B3 family protein