PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44691.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 238aa MW: 28117.6 Da PI: 7.4969

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.6	3e-13	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ed++l+ +v+++G ++W+ a+ g++Rt+k+c++rw +yl PHT44691.1 8 KGPWAEQEDLQLAFYVNLFGDRRWDFLAKVSGLRRTGKSCRLRWVNYL 55 79********************************************97 PP
2	Myb_DNA-binding	54.4	2.9e-17	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ l+++++ ++G++ W++Ia +++ gRt++++k++w++++ PHT44691.1 61 RGKMTPQEERLILELHSKWGNR-WSKIAIKLP-GRTDNEIKNYWRTHM 106 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MAQEEMRKGP WAEQEDLQLA FYVNLFGDRR WDFLAKVSGL RRTGKSCRLR WVNYLHPGLK 60 RGKMTPQEER LILELHSKWG NRWSKIAIKL PGRTDNEIKN YWRTHMRKKA QDERKNKAST 120 ISPSSSFSNS SSFYSNSPDV DFTPIMENNE RNFYDTGGVE KKINDGDKMK VYSMDEIWKD 180 IELPDESETM NNIKPIMSSP LWNYCPNNTL WMSDEEETKM FPQFYSYLDN QDNTFFAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	4e-75	MYB family protein