PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44887.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 380aa MW: 42860.2 Da PI: 8.7081

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.1	3.1e-31	73	126	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH rF +ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ PHT44887.1 73 PRLRWTPELHLRFAHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 126 8****************************************************7 PP
2	Myb_DNA-binding	54.1	3.5e-17	74	125	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++++av++lGg t+k++ + m+ kg++ ++ks++q+y+ PHT44887.1 74 RLRWTPELHLRFAHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 125 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MEGGSSSTEE SKLSPKNQIE FGEEEEEEDD LETEEKSKAQ GTTRTSSSNS TVEENGKKTN 60 SGSVRQYVRS KTPRLRWTPE LHLRFAHAVE RLGGQDRATP KLVLQLMNIK GLSIAHVKSH 120 LQMYRSKKTD DPSQTVSTDG RTLLENGDHH IFNLTQLPRL QGYNQTSSSS LRYENALWSR 180 QPNSMYNSYN VNIGGGSRTS TRHGFASHIN GYSSDGQLFP WNKPIDTEKN QNRPQFLQNQ 240 RFWPTQIGIS SAKQNLLMTL QFNRSTDTVE TATQFNRREQ EMMTQVRANI SLSSSRGKGW 300 TSEEVAGTIT STSNKRKIQD SEINLDLNLS LKATREDHDD HLKRLKAEQV GDLLSLSLYS 360 SSTNDQENNG KKANTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MEGGSSSTEE SKLSPKNQIE FGEEEEEEDD LETEEKSKAQ GTTRTSSSNS TVEENGKKTN  60
SGSVRQYVRS KTPRLRWTPE LHLRFAHAVE RLGGQDRATP KLVLQLMNIK GLSIAHVKSH  120
LQMYRSKKTD DPSQTVSTDG RTLLENGDHH IFNLTQLPRL QGYNQTSSSS LRYENALWSR  180
QPNSMYNSYN VNIGGGSRTS TRHGFASHIN GYSSDGQLFP WNKPIDTEKN QNRPQFLQNQ  240
RFWPTQIGIS SAKQNLLMTL QFNRSTDTVE TATQFNRREQ EMMTQVRANI SLSSSRGKGW  300
TSEEVAGTIT STSNKRKIQD SEINLDLNLS LKATREDHDD HLKRLKAEQV GDLLSLSLYS  360
SSTNDQENNG KKANTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-50	G2-like family protein