PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44949.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 247aa    MW: 28079.6 Da    PI: 4.4747
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.11e-05131152829
                 HHHHHHHHHHHHHHHHHCTSCC CS
         HLH   8 rErrRRdriNsafeeLrellPk 29 
                  Er+RR r+++++  Lr+l+P+
  PHT44949.1 131 SERKRRGRMKEKLYALRSLVPN 152
                 7********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MENNVKDVGL INFLDEDNFE QFIELIRGET GDPIVKFCPT YDCEYITGCF SAANAQFEPT  60
SMDFNDWNAT SMSDPFSLYT SLPRKMKIHE EDEEEDNDCD ESSATMITTT VTSGTPTKKS  120
TRTDRSGTLI SERKRRGRMK EKLYALRSLV PNITKMEVIP VEEKGFYVRL VCNKGRQVAA  180
SLFKALESLT GFNVQSSNLA TSINDYVLTF TLNAREYEMD RNFSNLKLWI ASAFLNQGFD  240
FETSPLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.19e-31bHLH family protein