PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45098.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 372aa    MW: 41962.6 Da    PI: 4.6769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-19128177255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  PHT45098.1 128 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 177
                 89*******.**********82....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MDHHNMLCPI KYTEHKKTIR KVTKSSTIKP KKTTQVRRSS EYNPTIPRTV RISVTDPDAT  60
DSSSDEDELF GRRRVKRYIN EISIETSSIN DVKALNTSRK RAAEVLQPKQ KALKGKEVQL  120
PADGTVRKFR GVRQRPWGKW AAEIRDPARR VRLWLGTYDT AEEAAMVYDN AAIKLRGSNA  180
LTNFITPPTK EKSEVNVASN SGYESGDESH NLSSPTSVLR FRTSQSSEEA EQQSGSEPIL  240
EETKGDVSVS EEQCPVLVEE PTLYSMQSLE NLECQGETSV SNEYLPNDVP FLDDFFNFGA  300
AEQTLFDDIT SFPNDLCTPF DDISSWDFAN DLLLDHEVFK FKDSFQDLGA LEVDNYFKDI  360
GDFSNVDALM AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-56ERF family protein