PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45130.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 301aa    MW: 33407.1 Da    PI: 10.2002
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.3e-125195147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PHT45130.1 51 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 95
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MVMALPNLGS FSNPTATASP AGATASTSNP LSPSDDPSKK IRKPYTITKS RESWTEPEHD  60
KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ KSGTNEHLPP PRPKRKAAHP  120
YPQKASKSAP AVSPVPTSFQ ASLPLPEPGF VKRPDSSFLP SNQATVVPVP SWTDNSVPPV  180
SLSQIKKDNV RETGQLVTNN RCCSSNESTP RSKSTVKVIE RTQAPSLRVL PDFAQVYNFI  240
GSVFDPAVTG HLQKLKKMDR IDVETVLLLM RNLSINLTSP DFEHDRQLLS SYDIDMEKKC  300
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-92MYB_related family protein