PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45221.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 257aa MW: 29483.1 Da PI: 6.6086

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.8e-07	5	36	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+W+++Ed +l+ +++ G +W++ ++ g PHT45221.1 5 KGPWSPQEDNILISYIQNNGHSNWRALPKLAG 36 79*************************99988 PP
2	Myb_DNA-binding	27.2	9e-09	62	89	19	48
TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqkyl 48 lG + W++Ia++++ gRt++++k+ w+++l PHT45221.1 62 LGRR-WSAIAARLP-GRTDNEIKNVWHTHL 89 6766.*******.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MGLKKGPWSP QEDNILISYI QNNGHSNWRA LPKLAGSSLL YLSIVMLSSL FSSFLYLCLW 60 HLGRRWSAIA ARLPGRTDNE IKNVWHTHLK KHLKNYQPPQ NSKRHFKTNH DSKKGPTTES 120 SNNSDFSTSA NNTNTHKKHM KIAPNSPVLS SSEMSTVTLV VDDRQRAIIK EEKIESPLEY 180 FPKIDESFWT EELSAEKNSD NDYVMAAGLD QDIQAQIQLS SVKEENLDNT STKMEEDMDF 240 WYNVFIKTGD FLELPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	9e-45	MYB family protein