PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45325.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 253aa    MW: 28292.9 Da    PI: 4.9403
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.7e-18959155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykG+r +k +g+Wv+e+r p++   r r++lg+++tae+Aa+a +aa  +l+g
  PHT45325.1  9 PKYKGIRLRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRG 59
                79******99.*******999833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MENGGPSQPK YKGIRLRKWG KWVSEVRLPN SRERIWLGSY DTAEKAARAF DAAQFCLRGP  60
KAKFNFPDSP PDISLSDRQR LSPAEIQAIA ARFANDDHSH SQSSSVVQEI RPLPSHGHDY  120
EGNMSNINSH VTNMEKDEMS LSSTTCNDPV VQMDTNNNST ATAAMAWASF DMWEDYPHHA  180
IGPPPDLFCD PHSSYAGTNY DSGYYPAGVL DSLSSNLYSP PHFPQRVTPN YDDDDTGNGG  240
DEHYPQQSFL WNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.19e-42ERF family protein