PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45341.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 207aa    MW: 22737.2 Da    PI: 7.9532
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS68.99.6e-2214123153266
        GRAS 153 g.skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhns 250
                 +  ++ l+ +g rL+k+Ae+l++ f f++ v +r++ ++l++L+++    l   l l   +++desvs+  +rd++L++vksl+Pkvv+vveqe++ n+
  PHT45341.1  14 QhATRGLNIIGLRLEKLAEALQLLFGFQA-VLSRTALFSLSMLNIQ----LLCELCLPASYMPDESVSTVTQRDQLLRMVKSLNPKVVTVVEQEVNDNT 107
                 247889***********************.7999*********886....77777888899************************************** PP

        GRAS 251 esFlerflealeyysa 266
                 ++F +r+++++ +   
  PHT45341.1 108 APFPQRIAKSITTTLL 123
                 *********9987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MDEINGGCDP ESVQHATRGL NIIGLRLEKL AEALQLLFGF QAVLSRTALF SLSMLNIQLL  60
CELCLPASYM PDESVSTVTQ RDQLLRMVKS LNPKVVTVVE QEVNDNTAPF PQRIAKSITT  120
TLLYLSPVRV KFVQPSSGSW RTGFPGTMYV LPRDCAAVQQ ATLGDASPSI KNPWHGIKII  180
ITSTHSTSAF DKFTKQRDIT KNAGGEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.13e-30GRAS family protein