PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45432.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 220aa    MW: 25606.1 Da    PI: 9.4676
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR158.81.8e-1849134290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  Yn+YA   GF vrk  ++++  +ge+t+r f Cs++g++++ +   ++++r+r e r+gC a++k k + +g wev +++  H+H++ 
  PHT45432.1  49 AYNSYAVVRGFGVRKGGKTNN-VKGETTRRLFLCSCKGQSDKLSPF-QERKRQRLEYRCGCMARIKFKIS-NGIWEVCEFNDVHSHPMI 134
                 5***************98877.8888**************999988.99999****************99.***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MKDAHGDKGK DFSTQEDFSV NEPNICNTSK NFIFEIDMKF NSEEESYNAY NSYAVVRGFG  60
VRKGGKTNNV KGETTRRLFL CSCKGQSDKL SPFQERKRQR LEYRCGCMAR IKFKISNGIW  120
EVCEFNDVHS HPMIEDNLKH FIHSGRRLTN ATKNIFGSMI DADIRTKKVV RYLQNEADMT  180
DPVWNITFLQ DAVRELWRQV HDLQWKLGAV RVRCSKRFAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-09FAR1 family protein