PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45591.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 122aa    MW: 14267.3 Da    PI: 5.9874
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.54.7e-1872118148
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 
                 lppGfrFhPtdeelv +yLk+k+++ ++el evi+ +d+yk++PwdLp
  PHT45591.1  72 LPPGFRFHPTDEELVGYYLKRKTDELEIEL-EVIPVIDLYKFDPWDLP 118
                 79****************************.99**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MGYRIIIHNK ICDYGISGRL HSFDWWDKNN NPEISGHRKR CFLATFQVLW KSENNELQLA  60
VGTFTLMAGI SLPPGFRFHP TDEELVGYYL KRKTDELEIE LEVIPVIDLY KFDPWDLPGI  120
HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.17e-16NAC family protein