PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45664.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 380aa MW: 41330.4 Da PI: 6.8983

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39.1	1.7e-12	46	70	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+rlrWt+eLHerFv+av+qLGG++ PHT45664.1 46 KQRLRWTNELHERFVDAVAQLGGPD 70 79*********************98 PP
2	Myb_DNA-binding	55.1	1.7e-17	48	147	1	48
TSSS-HHHHHHHHHHHHHTTTT...................................................-HHHHHHHHT.TTS-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...................................................tWktIartmg.kgRtlkqcks 42 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks PHT45664.1 48 RLRWTNELHERFVDAVAQLGGPdskfldfhfvqspsppgrmleiqpffgffglhtvtsallgplvlllylpgaTPKGVLRVMGvQGLTIYHVKS 141 89****************************************************************************************** PP HHHHHT CS Myb_DNA-binding 43 rwqkyl 48 ++qky+ PHT45664.1 142 HLQKYR 147 ***7 PP
3	G2-like	49.6	8.8e-16	120	148	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk +l++m+v+gLt++hvkSHLQkYRl PHT45664.1 120 ATPKGVLRVMGVQGLTIYHVKSHLQKYRL 148 9***************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MYQPKGVPTS SLAHNNVAVN NQSLDCAGGS MDPISGGNNN PSLASKQRLR WTNELHERFV 60 DAVAQLGGPD SKFLDFHFVQ SPSPPGRMLE IQPFFGFFGL HTVTSALLGP LVLLLYLPGA 120 TPKGVLRVMG VQGLTIYHVK SHLQKYRLAK YLPDSSSDGK NSDKKEPRDM LSSLDGSSGV 180 EITTALKLQM EVQKRLHEQL EVQKQLQLRI EAQGKYLKKI IEEQQRLSGV LSEVPGSGVT 240 APPTGDNGPE SDNRTDPGTP APSSESPHVD KPVKAHALTK SLSMDESFSS HHEPLSPDSD 300 FHETSPIESP NGERSSKKQR VGTSAAFTKD NMALPHQILE SSLSSPYQQP HSAFMTRDQF 360 NFTSGLSLGI DDQKVSGSNI

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MYQPKGVPTS SLAHNNVAVN NQSLDCAGGS MDPISGGNNN PSLASKQRLR WTNELHERFV  60
DAVAQLGGPD SKFLDFHFVQ SPSPPGRMLE IQPFFGFFGL HTVTSALLGP LVLLLYLPGA  120
TPKGVLRVMG VQGLTIYHVK SHLQKYRLAK YLPDSSSDGK NSDKKEPRDM LSSLDGSSGV  180
EITTALKLQM EVQKRLHEQL EVQKQLQLRI EAQGKYLKKI IEEQQRLSGV LSEVPGSGVT  240
APPTGDNGPE SDNRTDPGTP APSSESPHVD KPVKAHALTK SLSMDESFSS HHEPLSPDSD  300
FHETSPIESP NGERSSKKQR VGTSAAFTKD NMALPHQILE SSLSSPYQQP HSAFMTRDQF  360
NFTSGLSLGI DDQKVSGSNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-101	G2-like family protein