PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45693.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 112aa    MW: 12647.3 Da    PI: 5.5585
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.29.5e-0833106778
         NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeek..ew.yfFskrdkkyatgkrknrat 78 
                 F+P deel+  yL k v gk++e  ++i+ +d+y   +P d+   ++ + +  ++ y F++  kk++ gk+ +r++
  PHT45693.1  33 FRPIDEELI-SYLLKFVCGKPIEG-DHIRMLDLYGNkKPCDIFDDLSPDGEftDVnYLFTQLMKKSTGGKNIKRTV 106
                 9********.9************9.89******97549****74443333333445*********99999999965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MTMTMGYSPH HGDEQNNNGP FLVAHRDCTT SWFRPIDEEL ISYLLKFVCG KPIEGDHIRM  60
LDLYGNKKPC DIFDDLSPDG EFTDVNYLFT QLMKKSTGGK NIKRTVLGGG DT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-07NAC family protein