PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45696.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 330aa MW: 35321.8 Da PI: 7.2203

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128	9.6e-40	34	149	4	89
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............. 88 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+i+++tgt++++a+++ + s +ss+ + s++ PHT45696.1 34 VKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSIIAATGTGTIPANFStLNISLRSSGTTISAPpsksaplfihgga 132 5899***************************************************************99976667766666433334444556666666 PP TCP 89 ................k 89 + PHT45696.1 133 ttmlgfhhqlpgstfgQ 149 66666555555555541 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MEFRDSHNEN QDGGSSNNTN NNDSNNKALS TVVVKKPSKD RHTKVDGRGR RIRMPALCAA 60 RVFQLTRELG HKSDGETIEW LLQQAEPSII AATGTGTIPA NFSTLNISLR SSGTTISAPP 120 SKSAPLFIHG GATTMLGFHH QLPGSTFGQD PDENFMKKRY KEDTAGAGAT SPSSSSAKPE 180 RTGVQGTEPD QESKPGSSSY IPAPAMWAVG PAAGNVGNTF WMLPGTSSTM QRIGGFELPG 240 GGRFSPVQLG SMFLQQPQPV QQLGLGVTET NMGMLASMNA YNNNNNNNNS SSRGSGIDLG 300 MNLEQHHHHH HQNQQQNSDS GDENHKDSQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-58	TCP family protein