PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45781.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 854aa MW: 95673.7 Da PI: 7.9625

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174.6	1.4e-54	17	133	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwl+++ei++iL n++++ lt++++++p+ gsl+L++rk+vryfrkDG++w+kkkdgktv+E+hekLK g+ +vl+cyYah+e+n++fqrr+yw PHT45781.1 17 QEaNHRWLRPQEICEILRNHQSFYLTQQPPDKPPGGSLFLFDRKVVRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSSDVLHCYYAHGEDNKSFQRRSYW 115 5559********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Lee+le+i+lvhy+evk PHT45781.1 116 MLEEKLERIILVHYREVK 133 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MCCIIIVAMV DLEHILQEAN HRWLRPQEIC EILRNHQSFY LTQQPPDKPP GGSLFLFDRK 60 VVRYFRKDGH NWRKKKDGKT VKEAHEKLKA GSSDVLHCYY AHGEDNKSFQ RRSYWMLEEK 120 LERIILVHYR EVKEGYKVGA SRLQPVHPGP VLENPQSSST PWFESGLIIV QGSHTSNPSS 180 VDWKEQALSS ELHSDDSKGL VELSRDSFQL NSQVSSLMSA EFHGSCRNLL NVTLQQKFYS 240 GNLTVADLLS CNLTYGRWDA GKAVKDVANI RNRLTITSGE VFEENIHVAP GHSLSPDKLF 300 SISEFAPDWV YSGVETKVLI IGTFLDLGKR PTCQKWSCMF GEVEVPAEVL NEGVIRCQVP 360 SHAPGRVPFY LTCSNRVACS EVREFEYREN PSELALAHRP SDEECVEVQL AKLLYSGLNK 420 KLLDCSSGEC EKCKLKTLLC SLKFTAGNAS ERLEDLLSIS EGNHIIFGDV LKQSIMKDKL 480 YEWLVSRAHE EDKGPNILDD EGQGVIHLVA SLGYEWGLLP LIAAGISPNF RDARGRTALH 540 WAAHYGREDM VIALIKLGVA AGAVDDPTTA FPGGRTAADL ASSRGHKGIA GYLAESDLTA 600 LHQSLGTNNN ALDSIGAGLE AEKAFESAAQ EVVPLNGTID DDISLKGSLA SLTKSAQAAA 660 LIRAAFRSHS FRQRQLTKSR NDVFEDSPDL VSLGSLNKVQ KVKHYEDYLH SAAIKIQQNY 720 HGWNGRREFL KIQNRIVKVQ AHVHGHQVRK QYEKFVWSVS ILEKVILRWR RKKTGLRGFR 780 SEKTSQKGAL EKEDEYEYLS VGRKQKLAGV EKALARVQSM VRHPEARDQY MRLVTKFEST 840 KLDDGGAVDR SSPI

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MCCIIIVAMV DLEHILQEAN HRWLRPQEIC EILRNHQSFY LTQQPPDKPP GGSLFLFDRK  60
VVRYFRKDGH NWRKKKDGKT VKEAHEKLKA GSSDVLHCYY AHGEDNKSFQ RRSYWMLEEK  120
LERIILVHYR EVKEGYKVGA SRLQPVHPGP VLENPQSSST PWFESGLIIV QGSHTSNPSS  180
VDWKEQALSS ELHSDDSKGL VELSRDSFQL NSQVSSLMSA EFHGSCRNLL NVTLQQKFYS  240
GNLTVADLLS CNLTYGRWDA GKAVKDVANI RNRLTITSGE VFEENIHVAP GHSLSPDKLF  300
SISEFAPDWV YSGVETKVLI IGTFLDLGKR PTCQKWSCMF GEVEVPAEVL NEGVIRCQVP  360
SHAPGRVPFY LTCSNRVACS EVREFEYREN PSELALAHRP SDEECVEVQL AKLLYSGLNK  420
KLLDCSSGEC EKCKLKTLLC SLKFTAGNAS ERLEDLLSIS EGNHIIFGDV LKQSIMKDKL  480
YEWLVSRAHE EDKGPNILDD EGQGVIHLVA SLGYEWGLLP LIAAGISPNF RDARGRTALH  540
WAAHYGREDM VIALIKLGVA AGAVDDPTTA FPGGRTAADL ASSRGHKGIA GYLAESDLTA  600
LHQSLGTNNN ALDSIGAGLE AEKAFESAAQ EVVPLNGTID DDISLKGSLA SLTKSAQAAA  660
LIRAAFRSHS FRQRQLTKSR NDVFEDSPDL VSLGSLNKVQ KVKHYEDYLH SAAIKIQQNY  720
HGWNGRREFL KIQNRIVKVQ AHVHGHQVRK QYEKFVWSVS ILEKVILRWR RKKTGLRGFR  780
SEKTSQKGAL EKEDEYEYLS VGRKQKLAGV EKALARVQSM VRHPEARDQY MRLVTKFEST  840
KLDDGGAVDR SSPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-137	CAMTA family protein