PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45790.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 121aa    MW: 14128.6 Da    PI: 10.7269
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.29.2e-162875355
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +ahn+ Err RdriN ++  L++l+P+a      K +Ka++Le++++Y+k+Lq
  PHT45790.1 28 AAHNQSERRHRDRINGKMKALQKLVPNA-----SKTDKASMLEEVIKYLKQLQ 75
                69*************************9.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MDDLLQENKK EERETKSSNL SKRSRRVAAH NQSERRHRDR INGKMKALQK LVPNASKTDK  60
ASMLEEVIKY LKQLQAHVQL ITSARNMEQQ MMMMSLGMQP HIQMPLLARM AWVVLQECLT  120
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.16e-26bHLH family protein