PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45847.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 375aa    MW: 41529.8 Da    PI: 4.5693
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57.1e-18104153255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f +aeeAa+a++  +++++g
  PHT45847.1 104 QYRGIRQRP-WGKWAAEIRDPRK---GIRVWLGTFNSAEEAARAYDVEARRIRG 153
                 69*******.**********954...3************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MCGGAIISDL VPPSRISRRL TAELLWGNSD LSKKKKNPGN YYSKPLNRSK FIDLDEEFEA  60
DFQDFKDYAE DDVDDVKPFG SKSVKSGDSS CDTEKSSKRK RKNQYRGIRQ RPWGKWAAEI  120
RDPRKGIRVW LGTFNSAEEA ARAYDVEARR IRGKKAKVNF PDGSPASASR RAVKPNPQEA  180
LREEIFNTVQ PNTTYINNLD GGSDDSFGFF EEKPAAKPYG YESVSFTAGD MGLGSISPST  240
GTTNVYFSSD EGSNTFDCSD FGWGEPCPRT PEISSVLSEV LECNGTQSDE DARPEKKLKS  300
CSNASLPDED NTVHTLSEEL SAFESQMKFL QIPYLEGNWD ASVDAFLNTG AIQDGGNAMD  360
LWTFDDVPSL MGGVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.35e-73ERF family protein