PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45912.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 205aa    MW: 22673.9 Da    PI: 5.9431
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.66.4e-391978362
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ++ lkcprCds ntkfCyynny+lsqPr+fCk+C+ryWtkGG lrn+PvGg++rkn k+s
  PHT45912.1 19 QEVLKCPRCDSINTKFCYYNNYNLSQPRHFCKNCKRYWTKGGILRNIPVGGSSRKNSKRS 78
                6789****************************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MQDPSSLIYS QIKPQFPDQE VLKCPRCDSI NTKFCYYNNY NLSQPRHFCK NCKRYWTKGG  60
ILRNIPVGGS SRKNSKRSSS SSSCSKQSLR TSSLSPSSAQ NEKIEVFTTP PVTAFDQESP  120
ILDANGPFGP FLVSNGSEIG NLLEGLNPNG PNYSGSDDAA AQSENNTTRD DEYLDVQKGE  180
DSNCWNVNTN SWADLAIYTP GSRFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.13e-35Dof family protein