PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45924.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 204aa    MW: 23017.1 Da    PI: 10.2259
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.41.1e-07110152754
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++ rrRR+ri +++  L++l+P         ++ a++L +A +Y+k L
  PHT45924.1 110 AAARRRRERISERIRVLQKLVPGG-----SNMDTASMLDEAANYLKFL 152
                 567*******************95.....48***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MERKEYVSIG PSHTSTRDYG SQLIAGNDQP KSKKSRSEYK HPSSSNLNFH QASSSACSVD  60
EPDAEAIAHM KEMIYRAAAL RPMSSINTEE VMAEKPKRKN VRISTDPQTA AARRRRERIS  120
ERIRVLQKLV PGGSNMDTAS MLDEAANYLK FLRTQVNALK AFGFNIDPII INNNFTSLSS  180
IPFNYPFPMQ PHFPLQNLNP IHRP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197116KRKNVRISTDPQTAAARRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.15e-48bHLH family protein