PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45998.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 737aa MW: 84907.1 Da PI: 5.2495

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71	2.7e-22	129	212	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH + PHT45998.1 129 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTMKEAN-----SRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLF 212 69**************************************99888.....8999*****************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MEEGLGISEQ LPEDEGGDNE FVGVEVFDIT CNGIESDSDQ VRNIEITAGQ ILEFESLETE 60 RNCEHVLNFE SGDPRDNSHQ LLELHSDGLE DPRCGNTTIL DGHTGSSLGK SCPPLAVGME 120 FESYEDAYNY YNCYAKELGF AIRVKSSWTK RNSKEKRGAV LCCNCEGFKT MKEANSRRKE 180 TRTGCLAMIR LRLVESNRWR VDEVKLEHNH LFDPERMQNS KSHKKMDAGV KRKLEPAVDV 240 EVCTIKLYRT PAVETPGYGN SDERVSSQIY GSTRLNLKES DTQVIYSFFS RMQLMKPNFF 300 YIMDLNDEGY LKNVFWIESR SRAAYAYFGD VVVVDNTCLS KKYDIPLLAF FGLNHHNQTL 360 LLGCSLLADE SFETYVWLLR VWLSCMSGRP PQTIITDRCK ALQNAVSEVF PRAQHRLNLS 420 IILDSIVDTV GEMGGSEVFH EVLYNTVYSS LKVDEFEVAW EEMTQQFGCR GYGWLQSLYE 480 DRERWVPIYM KDTFLAGISI DDQHGEFMCP FFDGFVHKQT NLREFFDIYD FVLQKMHQKE 540 VLCDTESREF SPDLRTRCSY ELQLSKLYTK EIFLKFQDEM VLMSNCSGIA QIHVNGPIIT 600 YIVKERGVQG DTRGARDFEV TYDKIGVEVR CMCNCFNFKG YLCRHALSVL NYNGIEEIPN 660 HYILTRWRKN FKCLYASELG SSNIDISNPV QRFDHLHRRA MQVVDEGMTS QDHYMVAQQA 720 FKESLIKFHL AADKHVS

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MEEGLGISEQ LPEDEGGDNE FVGVEVFDIT CNGIESDSDQ VRNIEITAGQ ILEFESLETE  60
RNCEHVLNFE SGDPRDNSHQ LLELHSDGLE DPRCGNTTIL DGHTGSSLGK SCPPLAVGME  120
FESYEDAYNY YNCYAKELGF AIRVKSSWTK RNSKEKRGAV LCCNCEGFKT MKEANSRRKE  180
TRTGCLAMIR LRLVESNRWR VDEVKLEHNH LFDPERMQNS KSHKKMDAGV KRKLEPAVDV  240
EVCTIKLYRT PAVETPGYGN SDERVSSQIY GSTRLNLKES DTQVIYSFFS RMQLMKPNFF  300
YIMDLNDEGY LKNVFWIESR SRAAYAYFGD VVVVDNTCLS KKYDIPLLAF FGLNHHNQTL  360
LLGCSLLADE SFETYVWLLR VWLSCMSGRP PQTIITDRCK ALQNAVSEVF PRAQHRLNLS  420
IILDSIVDTV GEMGGSEVFH EVLYNTVYSS LKVDEFEVAW EEMTQQFGCR GYGWLQSLYE  480
DRERWVPIYM KDTFLAGISI DDQHGEFMCP FFDGFVHKQT NLREFFDIYD FVLQKMHQKE  540
VLCDTESREF SPDLRTRCSY ELQLSKLYTK EIFLKFQDEM VLMSNCSGIA QIHVNGPIIT  600
YIVKERGVQG DTRGARDFEV TYDKIGVEVR CMCNCFNFKG YLCRHALSVL NYNGIEEIPN  660
HYILTRWRKN FKCLYASELG SSNIDISNPV QRFDHLHRRA MQVVDEGMTS QDHYMVAQQA  720
FKESLIKFHL AADKHVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein