PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46011.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 204aa    MW: 23347.1 Da    PI: 8.528
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00026183123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C++ F ++  L  H++ H
  PHT46011.1 61 FSCNYCHRNFYSSQALGGHQNAH 83
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MNSQNQSGQQ QNDEHENNGL ILDLTLLCNW DSKPSDDHTF HTISSSDDSQ GNNDEKEHQV  60
FSCNYCHRNF YSSQALGGHQ NAHKRERITI AKRKQNMASM PIMHGSFHRS LGIQAHSIIQ  120
KPVMSFNTFR APAFPLLYNT HSAGWWSRRR MDQLPAIGRL IMPESHGTGR LNFGHMNKFP  180
VVIDSHLMTN HQEDSKKLDL SLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.19e-26C2H2 family protein