PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46018.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 360aa MW: 39646.3 Da PI: 8.0453

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.3	4.3e-30	172	231	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y+rC++a +Cpvkkkv+rs ed+++v+ tYegeHnh+ PHT46018.1 172 VKDGYQWRKYGQKVTRDNPCPRAYFRCSFApTCPVKKKVQRSIEDQSIVVATYEGEHNHP 231 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MEFTSLVDTS LDLSFRPRPV LDKLPKQEVQ SDFTGLRGDN MGVKNETVDL LEELNRVSSE 60 NKKLTEMLTV VCENYNVLRN QMMEYMSTQN GLADDSAGSR KRKAESISNP NNSNININNN 120 NNNNLDVVPG RSSESSSSDE ESSCKKLREE HIKAKVTVVS MKTDASDTSL IVKDGYQWRK 180 YGQKVTRDNP CPRAYFRCSF APTCPVKKKV QRSIEDQSIV VATYEGEHNH PMTSKPEAGG 240 ANTTSTSTGS RLNVTTIAGT TASVPCSTTL NPSGPTITLD LTAPKTVEKR DMKMNQSASP 300 TCGNSIHTST GVEYQNRPEF QQFLIEQMAT SLTKDPSFKA ALAAAISGKI LQHNNQTGRW

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MEFTSLVDTS LDLSFRPRPV LDKLPKQEVQ SDFTGLRGDN MGVKNETVDL LEELNRVSSE  60
NKKLTEMLTV VCENYNVLRN QMMEYMSTQN GLADDSAGSR KRKAESISNP NNSNININNN  120
NNNNLDVVPG RSSESSSSDE ESSCKKLREE HIKAKVTVVS MKTDASDTSL IVKDGYQWRK  180
YGQKVTRDNP CPRAYFRCSF APTCPVKKKV QRSIEDQSIV VATYEGEHNH PMTSKPEAGG  240
ANTTSTSTGS RLNVTTIAGT TASVPCSTTL NPSGPTITLD LTAPKTVEKR DMKMNQSASP  300
TCGNSIHTST GVEYQNRPEF QQFLIEQMAT SLTKDPSFKA ALAAAISGKI LQHNNQTGRW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	2e-83	WRKY family protein