PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46030.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 322aa MW: 36407.9 Da PI: 4.9286

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.2	1.8e-20	179	262	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn Y ke+GF +r ++s +++ ++e+ + ++C+ eg+++ ++ + ++ +e rtgC a++++++ ++++w+v++++leHnH + PHT46030.1 179 NYYNCYTKELGFAIRLKSSWTKRSSKEMRGAVLCCNSEGFKTMKEAN-----SRIKEARTGCLAMIRLRLVESNRWKVDDVKLEHNHLF 262 69**************************************99888.....788999***************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MKKVKMEWAW VGFRHCENWF GSIWLGIFAD SRVGSELTGS GAIDVIEEGL GISEQLPEDE 60 GGDNEVVGVE VFDITCNGIE SDSDQVLNIE ANELETGAGQ IPEFESHENE RNCKHVRNFE 120 SGDPRANSHQ LLELHSDGLE DPRCGNTTIL DGHTGSSLGK SYPPLVVCME FESYEDAYNY 180 YNCYTKELGF AIRLKSSWTK RSSKEMRGAV LCCNSEGFKT MKEANSRIKE ARTGCLAMIR 240 LRLVESNRWK VDDVKLEHNH LFYPERVQNS ESQKKMDAGV KRKLEPAVEV EVCTIKLYRT 300 PAVLLLRHQA METQMNEQSA VR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	199	206	TKRSSKEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	2e-51	FAR1 family protein