PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46036.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 225aa    MW: 25771.7 Da    PI: 4.7977
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.2e-1679130155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV +++ +grW+A+I   +   g +k+ +lg++ ++eeAa a++ a+ +++g
  PHT46036.1  79 SRYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYASEEEAAMAYDMAAIEYRG 130
                 79****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVVVMTSNQH AVYLGAYNDE EAAGHAYDLA ALKYWGQHTI LNFPVSMYEK EIKEMEGVSR  60
EEYIGSLRRK SSGFSRGVSR YRGVARHHHN GRWEARIGRV FGNKYLYLGT YASEEEAAMA  120
YDMAAIEYRG QNAVTNFDLS RYLNTIPNTN QILEKTSAVD PPETPPESEK PRRSFPDYIQ  180
TYFEVCQDSS SFVDDEHDII FGELDSFVLP MFQCELECCP NIEAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.21e-76ERF family protein