PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46088.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 255aa MW: 27983.8 Da PI: 6.638

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	150	186	14	55
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ +++ L +l+ + +K + a++L +A+ YI+ Lq PHT46088.1 150 EKLGDRITSLHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 186 66778889999999887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MVEKTCVRSE FSGDEEKFGI SPFHEAGNSE DQSLNSVHPT SSSSVATNFR VPVADVKPEL 60 GQLYDYHRHQ HHHHHVHNEF QTSSLQEKLE LATDHFTRPL ASNWSQQDLP SPASSCITTG 120 LSHNLLNFSN SKGEHKHQHP DHNSTEVRKE KLGDRITSLH QLVSPFGKTD TASVLSEAIG 180 YIRFLQAQIQ ALSSPYLGNA SGSMGHIPQQ SVNDSQHKPT DLRSRGLCLV PISCMANVGS 240 DTGADYWAPA LGGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	5e-44	bHLH family protein