PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46165.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 360aa    MW: 40827.3 Da    PI: 7.9542
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46165.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP122.16.3e-381102624133
         TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssa...sec...eaes 77 
                  kdrhski T++g+RdRR+Rls+e a++fF Lqd LGfdk+skt+eWLl+++  ai el+ t                       +   sec   +  +
  PHT46165.1 110 SKDRHSKINTARGPRDRRMRLSLEAARKFFSLQDLLGFDKASKTVEWLLNKSDSAIEELAATnkqnsctttttttgigaicA---SnslSECeviSGTD 205
                 79************************************************************88888877777776655543...03357787774444 PP

         TCP  78 ssssasnsssg.kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                 + ss+++++++ k +k+++k+k +++  a +  l +esr +ara arert+ k++ +
  PHT46165.1 206 ETSSNDKNKETiKGEKKKKKKKTNPALRAGFEPLTRESRDRARAWARERTKIKKMSQ 262
                 4444444444446666777899999999999*****************999776655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MYSPSSNNCN YSPILSSINS FHIPSPSMQY ENELFFQSYH HDHIYFQQQQ QEEEVPLIED  60
LSLHILADST KTVLEGIVEE GGEGKGDDTM SSRNSIISGR ISKNNKRSSS KDRHSKINTA  120
RGPRDRRMRL SLEAARKFFS LQDLLGFDKA SKTVEWLLNK SDSAIEELAA TNKQNSCTTT  180
TTTTGIGAIC ASNSLSECEV ISGTDETSSN DKNKETIKGE KKKKKKKTNP ALRAGFEPLT  240
RESRDRARAW ARERTKIKKM SQIDKSKAPA NDLNPSGSNW KPINKSREEH VIHEQLMTFH  300
QEKQQLIGTN KENNIVDENN LVFNGNWNPF SIFNYHDQNA GISNEHQFTD FQFCGKLWEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221227KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.21e-20TCP family protein