PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46448.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 205aa    MW: 23877.2 Da    PI: 7.3486
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.93.6e-137614199
                TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 41 esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +  rsW+v +  +kk++ +++ +GW +Fv +n+L+ gDf++F++ g+s+   +vk+++k
  PHT46448.1  7 LAARSWKVVV--EKKDDNFFFMEGWVDFVLENNLEFGDFLTFSYAGNSKI--YVKIYEK 61
                5679******..********************************997666..9999876 PP
2B332.41.6e-10116203698
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +++ +l+++rl +p  f +++ +k e++  +      + sW++ +    + +r+ l kG ++F  +n L+e+D++ Fkl+++++  l+v++ r
  PHT46448.1 116 IKAWHLSNARLNFPAAFGNRF-LKREQP-LVATLRAGNASWRIVV---HCFDRFQLWKGMRKFITDNALRENDVCRFKLIDDEKLILNVRISR 203
                 56778999*********9887.445566.4555556789****99...6777899*************************9999999998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
METFLRLAAR SWKVVVEKKD DNFFFMEGWV DFVLENNLEF GDFLTFSYAG NSKIYVKIYE  60
KNGSLRQDVT ALKEPELVTS EEENEQEEGV VAQPADQTPE RSRSPVASIN SCEIVIKAWH  120
LSNARLNFPA AFGNRFLKRE QPLVATLRAG NASWRIVVHC FDRFQLWKGM RKFITDNALR  180
ENDVCRFKLI DDEKLILNVR ISRYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.12e-09B3 family protein