PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46561.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 287aa MW: 33371.4 Da PI: 6.001

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.9	2e-49	10	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGf+F P+deel+++yL +k++++k l l+ + e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat sgyWkatgkd++vl+ ++ PHT46561.1 10 LPPGFKFCPSDEELICHYLYNKIANEKgLVLNGSLVEIDLHTCEPWQLPEVAKLNSSEWYFFSFRDRKYATGFRANRATISGYWKATGKDRTVLDPrTR 108 79*******************99996666667***********87788899**********************************9667 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfyk+rap+g ktdW+mhe+rl PHT46561.1 109 NIIGMRKTLVFYKNRAPNGIKTDWIMHEFRL 139 77*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MDLREIGATL PPGFKFCPSD EELICHYLYN KIANEKGLVL NGSLVEIDLH TCEPWQLPEV 60 AKLNSSEWYF FSFRDRKYAT GFRANRATIS GYWKATGKDR TVLDPRTRNI IGMRKTLVFY 120 KNRAPNGIKT DWIMHEFRLQ NPQVPLKEDW VLCRVFHKDK GHDNNNNNCT NKLNSQNKYE 180 AIVTCSNLSQ SPLHVNQHSL HCDISYQNPP HDEISQNSNA IHHQLFDLLV KDHHENTCLS 240 QCGQGDDQCG LLFDMQMDFQ EPYFQEEEIH SSLEDMRFDD ENSAVFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	4e-87	NAC family protein