PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46569.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 195aa    MW: 21857.8 Da    PI: 4.8717
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000234971123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C  C++ F++   L  H++ H
  PHT46569.1 49 YECVFCKRGFNTAQALGGHMNIH 71
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MTSNKIDDLL MESSNQGDYS LNSSINQEVD QLQQDRQEYY YMGGGGRFYE CVFCKRGFNT  60
AQALGGHMNI HRKDKSTRNK PTTSTHNLLI SSSTNKNDIH ISSGANLRCY NVAEGQSNYL  120
THFPELSTST STNGQILLNH NAIDSSRDDD DNHNIQCLNL FGGTGAPYVI ETMEKNSEED  180
DLDLELRLGH DPLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-14C2H2 family protein