PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46667.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 629aa MW: 71503.4 Da PI: 6.1227

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.9	6.1e-21	493	589	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +kvl++sdv+++gr+vlpk+ ae+h ++++ ++ + +ed ++r+W++k+++ ++ks++y+l+ ++ +FvkangL+egDf+v++ + +++++++ PHT46667.1 493 QKVLKQSDVNNLGRIVLPKREAERHlpHLETRDGISIAMEDiGTSRVWNMKYRFwpNNKSRMYLLE-NTGDFVKANGLQEGDFIVIYA--DmKCGKYLI 588 79***********************999999****7778***99777777777777.******************5..448887776 PP E CS B3 95 k 95 + PHT46667.1 589 R 589 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MDRKLHELHG NTNNQDENIN MVQSVDDDIQ MLQQQPTDFD PMEDTDIWLN ENFSTDFTSL 60 QDFPCMSSSS STSYSPPTEL SDPSSGVVLK SDAEQDFDKK IDSIGDQECL NVMENLEYMD 120 LIDVNEFLDP MISFLHSENQ NPQEQQQQEL VVKEKGKVPF EDDQQVSIFQ GDSELALMFF 180 EWLKHNKDYI SAEDMRSIKL KRSTIESASR RLGSNKEGKK QLLRLILDWV EQHRLQKKQM 240 TEAQAINQQC LQNCAPCNFD PNACFYPPQW MANPAYNAPF PEPMQGYIGD AYCNGSYFAT 300 PLNHTVNGGV SSPLSAEYQP MDTSQSWSPS QFTMATASQY NQFPENDGSN NVAMADQSQS 360 LLSTQYDPYQ IFDGNGEALP RLGSCATKEA RKNRMARQRR VRPHHYRHQN RNQRQISNEK 420 SVMMGGEINN CAMTQANNPG NWVCWTSPPM VMVPQPLPLE RPAVQPPQSH QKNGSADKKQ 480 AIKTEKNLKF LLQKVLKQSD VNNLGRIVLP KREAERHLPH LETRDGISIA MEDIGTSRVW 540 NMKYRFWPNN KSRMYLLENT GDFVKANGLQ EGDFIVIYAD MKCGKYLIRG VKVRPNGPKL 600 EGKKQAKKNL RKLSSAAAIS SSPVAQAVR

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MDRKLHELHG NTNNQDENIN MVQSVDDDIQ MLQQQPTDFD PMEDTDIWLN ENFSTDFTSL  60
QDFPCMSSSS STSYSPPTEL SDPSSGVVLK SDAEQDFDKK IDSIGDQECL NVMENLEYMD  120
LIDVNEFLDP MISFLHSENQ NPQEQQQQEL VVKEKGKVPF EDDQQVSIFQ GDSELALMFF  180
EWLKHNKDYI SAEDMRSIKL KRSTIESASR RLGSNKEGKK QLLRLILDWV EQHRLQKKQM  240
TEAQAINQQC LQNCAPCNFD PNACFYPPQW MANPAYNAPF PEPMQGYIGD AYCNGSYFAT  300
PLNHTVNGGV SSPLSAEYQP MDTSQSWSPS QFTMATASQY NQFPENDGSN NVAMADQSQS  360
LLSTQYDPYQ IFDGNGEALP RLGSCATKEA RKNRMARQRR VRPHHYRHQN RNQRQISNEK  420
SVMMGGEINN CAMTQANNPG NWVCWTSPPM VMVPQPLPLE RPAVQPPQSH QKNGSADKKQ  480
AIKTEKNLKF LLQKVLKQSD VNNLGRIVLP KREAERHLPH LETRDGISIA MEDIGTSRVW  540
NMKYRFWPNN KSRMYLLENT GDFVKANGLQ EGDFIVIYAD MKCGKYLIRG VKVRPNGPKL  600
EGKKQAKKNL RKLSSAAAIS SSPVAQAVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-115	B3 family protein