PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46709.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 315aa    MW: 35455.8 Da    PI: 9.8026
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.5e-072468345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+ E + + +a +++ ++   +W ++a++++ g++  +++  + 
       PHT46709.1 24 KWTPAENKAFENALALFDKDtpdRWQRVAEMVP-GKSVGDVIRQYK 68
                     8********************************.***999988875 PP
2Myb_DNA-binding28.34e-09146184947
                      HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
       PHT46709.1 146 EKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 184
                      689***********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEILSPAPYL ANPSWFLDEG KSTKWTPAEN KAFENALALF DKDTPDRWQR VAEMVPGKSV  60
GDVIRQYKEL EDDVSRIEAG LITIPGYSTS PFTLEWGNSH SFDGYKQTYV VGGKRPLSSR  120
PPEQERKKGA DSIELIIIRV HVKIPEKLFL MGLKKYGKGD WRNISRNFVV TRTPTQVASH  180
AQKYFIRQLS GGKDKRRASI HDITTINLHD NQTSSPDYQK PTSPDQPAVI SQQPKSAANA  240
MHKMPFQWNQ ANNGTAMGFN SAQGSLFMSP LYGGNSYGNN KMQSQSLQRG DLHEPYFGSQ  300
SMNFQLQSAH QYHQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-91MYB family protein