PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46762.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WOX
Protein Properties Length: 237aa    MW: 26823.1 Da    PI: 7.1753
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.28e-202079357
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                +R+++tkeq++ Le+l+ +  r+psae++++++ +l    +++ ++V++WFqN++a++++
  PHT46762.1 20 SRWNPTKEQIDLLESLYGQgIRTPSAEQIQQITGRLrafgHIEGKNVFYWFQNHKARQRQ 79
                6*****************99**************************************97 PP
2Wus_type_Homeobox112.13e-361980364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                        +RW+Pt+eQi +Le+ly +G+rtP++e+iq+it +L+++G+ie+kNVfyWFQN+kaR+rqk
         PHT46762.1 19 GSRWNPTKEQIDLLESLYGQGIRTPSAEQIQQITGRLRAFGHIEGKNVFYWFQNHKARQRQK 80
                       58***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MNDNTSVDML TTSGGTPVGS RWNPTKEQID LLESLYGQGI RTPSAEQIQQ ITGRLRAFGH  60
IEGKNVFYWF QNHKARQRQK EKQDKFAYFN QFLLRTPVFP PPNCPNGFVV VCSPYYTPQS  120
NLGFYQQYPV IQSVIIPGPG CFNRRETCDS TVHNMDATST HCQVKSNMEY VVPDVRQFKQ  180
ETLELFPLHP TGLLQEKTTS SSANHDHQSS VTTTCCPTDL EIRAADHPPV FNFLCGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.15e-48WOX family protein