PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47035.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 259aa    MW: 28423.7 Da    PI: 6.9039
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57e-1871119355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+ +++g
  PHT47035.1  71 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAAVSIKG 119
                 9****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MKEVEVVQIS EAESCNSSSS SSSSSSLSTD SMHKSVFDSS KALLEEEKKQ PRKRTKKQRT  60
ATNSESIHKI YRGVRMRSWG KWVSEIREPR KKSRIWLGTY PTAEMAARAH DVAAVSIKGN  120
TAILNFPHLI NFLPRPVSNA PRDVQAAAAK AASMADLSSS CVPSSSSSST SSTTTTSSGS  180
EELCEIIQLP NLEENNYDPK TELRLSDSVE GLLYSPWWST TTTTDGTDFC GYFLEQYAAA  240
AGESFTSCSF ETLKWACQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.18e-44ERF family protein