PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47039.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 355aa    MW: 38623.4 Da    PI: 6.5648
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.95.1e-17243277135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  PHT47039.1 243 CLHCASDKTPQWRTGPMGPKTLCNACGVRYKSGRL 277
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MEASDFFVSG FFSHAGDEQN PNNNNNSNGN NFIVDELLDF PNEDEVMADA FFDSITGNNS  60
ADSSTVTVVD SCNSSVSAGD AQFNGNLSCR SFTDAPFPTS ELCVPYDQVA ELEWLSNFVE  120
ESFSSDDLQN LQFVPVPNVN STTQTTDSSS SATTISTGIS SPLVFPADTS VPGKARSKRS  180
RAAPCDWSSR LKLLLSPATS SSDSSNNNNN AGSAVNNNAA FTGKASKAPS RKRENVEVPG  240
RKCLHCASDK TPQWRTGPMG PKTLCNACGV RYKSGRLVPE YRPASSPTFI SAKHSNSHRK  300
VLELRRQKEL HRVQQVHHHQ HQLLSQPTIF GVSNGGDEFL LHHHQNCGPN FRHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-70GATA family protein