PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47064.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 295aa    MW: 32524.8 Da    PI: 7.5267
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.7e-10541252290
                 H.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3  22 faeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                  a++h  +++++ ++ + +ed   + +W++k++y  ++ks++y+l+ ++ +Fv angL+eg f+v++   + +++
  PHT47064.1  54 EAKTHlpQLESRDEISIAMEDiGPSHVWNMKYRYwpTNKSRMYLLE-NTGDFVLANGLQEGNFIVIYA--DiKCG 125
                 4666678777778889999995566*********777777778777.*******************95..33444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MKDRHTGRPR GSGFITYVVP TIVDTVIAKN YIINDKLVDT VIAQNHIIND KQKEAKTHLP  60
QLESRDEISI AMEDIGPSHV WNMKYRYWPT NKSRMYLLEN TGDFVLANGL QEGNFIVIYA  120
DIKCGKYISV MTGGQINSCA MPQASNQGNW VYWPSDAATT PIVVVPQADA PQSFPTGRRA  180
SQSQNHKKHG LGEYIIFCQA VVAAQAGASV IKIFVGRLKG YYQSNTHSLG AFSCKQNTDS  240
EETTITWSRC SCMADGQSDV SLPKNSIHGS GYPNTLTSIE NWQLSAGLIV DSAEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.19e-39B3 family protein