PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47205.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 350aa    MW: 38672.9 Da    PI: 8.2292
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-192475156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                +++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+g+
  PHT47205.1 24 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 75
                6799******.7*********....4456*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MKQPAPQPSD GIRGRRKPSS RGHPRFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED  60
AARAYDQAAR TLRGANARTN FELPASDPHH GSSILENSEP FNFEEACRTD EPENGLVGAL  120
KAKLFNSKNS RSFIQAYDSN TNCQLVSKTK PSVPTLEIKK TASQTGQAEK LRKRGHTTHV  180
NSIGQGKNYS ENLFSGNHNL DYISLMRNDC QPVISSSQCQ NNQWDRRTNS AIMWANEQGR  240
LPWGEPQMSR GHNEVSFSTT NNYTNTDIFG GGNSTTACTW PVSVSEPTVN LSTFGEADVL  300
NGPMMMPHMN GLTQTASVPI EQQLLQFETG LWGAGENATW DPFLLSSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18ERF family protein