PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47509.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 163aa    MW: 18493.5 Da    PI: 5.298
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-18750249
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
                +y+GVr+++ +g+Wv+eIr+ps    ++r++lg++ tae+Aa+a+++a
  PHT47509.1  7 KYRGVRQRH-WGSWVSEIRHPSL---KTRIWLGTYETAEDAARAYDEA 50
                8*******9.**********944...5*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MAPPQQKYRG VRQRHWGSWV SEIRHPSLKT RIWLGTYETA EDAARAYDEA TRLVCGPTAR  60
TNFPYNADDS QSFLSSALIA KLQRCQMTSF TTMPKRPGTT KLEDGKKENQ ISPFTRNRGD  120
GDQGQSTESA SQQFNALEDE HIDQMIEELL DYGSIEMSSV LQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-59ERF family protein