PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47558.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 201aa MW: 22019.8 Da PI: 6.2735

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47558.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30	1.3e-09	24	49	28	53
AP2 28 rkrfslgkfgtaeeAakaaiaarkkl 53 ++r++lg+f taeeAa+a+++a+ + PHT47558.1 24 KRRVWLGTFETAEEAARAYDEAAVLM 49 59********************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MVLHNQGVPH SFLEVEMNPY SILKRRVWLG TFETAEEAAR AYDEAAVLMS GRNAKTNFPV 60 QAPDDENKKD NSNSNASSGS SSSSSSSLSA ILSAKLRKSC KSPSPSLTCL RLDTESSNIG 120 VWQKRAGAHP DSCWVMTVEF GKKKMMNDND QIIPDKNIIT SSSTLSSPGT STEIKEGKVC 180 GVMNEEERMA LQMIEELLNR N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15360.1	9e-37	ERF family protein