PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47633.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 276aa    MW: 30373.9 Da    PI: 7.777
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA36.21.9e-11156179326
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRaklee 26 
                 p+YVNaKQy++IlkRRq Rak+++
  PHT47633.1 156 PIYVNAKQYSAILKRRQLRAKIAR 179
                 9********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MWNSSDQLEH APSKKTGVKS PLKHHSDIKK SEFEFQDQDS TSTLSTGQSN LVEAAMGKSK  60
TVLQNLTVYP GWGGILDVQT ESGTKASLSG EISTNTLPQP QVHHDHPTAC LSYPWADTYF  120
GRLVATYGSN AIIYPQMVGV TSTRVALPLE CTEILPIYVN AKQYSAILKR RQLRAKIARG  180
YGGHFLNTKN MQQSKPSSPK NDRNIFNRQA GGNISSYMVQ HSESGSWGTS TQSGSDVTSI  240
FNGDDMFQQP EFRVSGFPFH MGATMQEAED FMHVGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-23NF-YA family protein