PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47658.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 199aa    MW: 22902.6 Da    PI: 10.591
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.92e-32135190258
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  ++vrY eC++NhAa++Gg+avDGC+Efm+s geegt+aal+CaACgCHRnFHRrev+
   PHT47658.1 135 RNVRYVECQRNHAANIGGYAVDGCREFMAS-GEEGTTAALTCAACGCHRNFHRREVD 190
                  689**************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MWHLLTGEVK FVVCVVIKRI LPNFWTKKSI ETIIEKGHCL SCSHIPPPQF SKFLPFLISL  60
FFFFFFFQFE HSKAATTTIY RQARVRFKFS RPKIKSCDQN KLTRSLFRGF LVNPRMMKRR  120
QVVVRRNTST TSSTRNVRYV ECQRNHAANI GGYAVDGCRE FMASGEEGTT AALTCAACGC  180
HRNFHRREVD GGEVVSESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.17e-19ZF-HD family protein