PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47733.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 530aa MW: 57697.7 Da PI: 8.3477

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.5e-12	234	282	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++ + Lr ++P++ ++K +Ka+ L +++eYI+ Lq PHT47733.1 234 RSKHSATEQRRRSKINDR-HMLRGIIPNS----DQKRDKASFLLEVIEYIHFLQ 282 889*************.89***9....9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MSVVHANKEG GYLKTHDFLQ PLEQAEMTSR KEDTKVEVVA VERPSPPLAA TPSGEHTLPG 60 GIGTFSISYL HQRVPKPEAS LFSVAQASST DRNDENSNCS SYTGSGFTLW DESAVNKGKT 120 GKENSGGDRH ILREAGVNTG GVHPTTSLEW QSQSSSNHKH NTAALSSLSS AQQSSPLKSQ 180 NFLHMITSAK NAQDDDDDED EDFVIKKEPQ SHPRGNLSVK VDGKGNDQKP NTPRSKHSAT 240 EQRRRSKIND RHMLRGIIPN SDQKRDKASF LLEVIEYIHF LQGKVHKYEE SYQGWDNEPL 300 KLPLSKCHRT THGVSNHPQC TINASGAAVP YARKFDESVM AISSANPINV QKLEPNISTT 360 SLKENGQQPG LTNKATALPM HPNTFSFCGT NSNAALHSSK LMADTDKLES KSHSEFSLSR 420 SHMTDYAIPN TNPKGQALSI ESGTISISSA YSQGLLNTLT QALQNSGVDL SQANISVQID 480 LGKRANGRVN SSASTIKGDD VSTSNQPTPQ SRVTTTREVS DQAFKRRKTS

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MSVVHANKEG GYLKTHDFLQ PLEQAEMTSR KEDTKVEVVA VERPSPPLAA TPSGEHTLPG  60
GIGTFSISYL HQRVPKPEAS LFSVAQASST DRNDENSNCS SYTGSGFTLW DESAVNKGKT  120
GKENSGGDRH ILREAGVNTG GVHPTTSLEW QSQSSSNHKH NTAALSSLSS AQQSSPLKSQ  180
NFLHMITSAK NAQDDDDDED EDFVIKKEPQ SHPRGNLSVK VDGKGNDQKP NTPRSKHSAT  240
EQRRRSKIND RHMLRGIIPN SDQKRDKASF LLEVIEYIHF LQGKVHKYEE SYQGWDNEPL  300
KLPLSKCHRT THGVSNHPQC TINASGAAVP YARKFDESVM AISSANPINV QKLEPNISTT  360
SLKENGQQPG LTNKATALPM HPNTFSFCGT NSNAALHSSK LMADTDKLES KSHSEFSLSR  420
SHMTDYAIPN TNPKGQALSI ESGTISISSA YSQGLLNTLT QALQNSGVDL SQANISVQID  480
LGKRANGRVN SSASTIKGDD VSTSNQPTPQ SRVTTTREVS DQAFKRRKTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	6e-72	bHLH family protein